iterativeBMA

DOI: 10.18129/B9.bioc.iterativeBMA    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see iterativeBMA.

The Iterative Bayesian Model Averaging (BMA) algorithm

Bioconductor version: 3.8

The iterative Bayesian Model Averaging (BMA) algorithm is a variable selection and classification algorithm with an application of classifying 2-class microarray samples, as described in Yeung, Bumgarner and Raftery (Bioinformatics 2005, 21: 2394-2402).

Author: Ka Yee Yeung, University of Washington, Seattle, WA, with contributions from Adrian Raftery and Ian Painter

Maintainer: Ka Yee Yeung <kayee at u.washington.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("iterativeBMA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iterativeBMA")

 

PDF	R Script	The Iterative Bayesian Model Averaging Algorithm
PDF		Reference Manual

Details

biocViews	Classification, Microarray, Software
Version	1.40.0
In Bioconductor since	BioC 2.3 (R-2.8) (10.5 years)
License	GPL (>= 2)
Depends	BMA, leaps, Biobase(>= 2.5.5)
Imports
LinkingTo
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SystemRequirements
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URL	http://faculty.washington.edu/kayee/research.html
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	iterativeBMA_1.40.0.tar.gz
Windows Binary	iterativeBMA_1.40.0.zip
Mac OS X 10.11 (El Capitan)	iterativeBMA_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/iterativeBMA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/iterativeBMA
Package Short Url	http://bioconductor.org/packages/iterativeBMA/
Package Downloads Report	Download Stats