goTools

DOI: 10.18129/B9.bioc.goTools    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see goTools.

Functions for Gene Ontology database

Bioconductor version: 3.8

Wraper functions for description/comparison of oligo ID list using Gene Ontology database

Author: Yee Hwa (Jean) Yang <jean at biostat.ucsf.edu>, Agnes Paquet <paquetagnes at yahoo.com>

Maintainer: Agnes Paquet <paquetagnes at yahoo.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("goTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("goTools")

 

PDF	R Script	goTools overview
PDF		Reference Manual
Text		LICENSE

Details

biocViews	GO, Microarray, Software, Visualization
Version	1.56.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 14 years)
License	GPL-2
Depends	GO.db
Imports	AnnotationDbi, GO.db, graphics, grDevices
LinkingTo
Suggests	hgu133a.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	goTools_1.56.0.tar.gz
Windows Binary	goTools_1.56.0.zip
Mac OS X 10.11 (El Capitan)	goTools_1.56.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/goTools
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/goTools
Package Short Url	http://bioconductor.org/packages/goTools/
Package Downloads Report	Download Stats