Mfuzz

DOI: 10.18129/B9.bioc.Mfuzz    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see Mfuzz.

Soft clustering of time series gene expression data

Bioconductor version: 3.8

Package for noise-robust soft clustering of gene expression time-series data (including a graphical user interface)

Author: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Maintainer: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Mfuzz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Mfuzz")

 

PDF	R Script	Introduction to Mfuzz
PDF		Reference Manual

Details

biocViews	Clustering, Microarray, Preprocessing, Software, TimeCourse, Visualization
Version	2.42.0
In Bioconductor since	BioC 1.8 (R-2.3) (13 years)
License	GPL-2
Depends	R (>= 2.5.0), Biobase(>= 2.5.5), e1071
Imports	tcltk, tkWidgets
LinkingTo
Suggests	marray
SystemRequirements
Enhances
URL	http://mfuzz.sysbiolab.eu/
Depends On Me	cycle
Imports Me
Suggests Me	pwOmics
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Mfuzz_2.42.0.tar.gz
Windows Binary	Mfuzz_2.42.0.zip
Mac OS X 10.11 (El Capitan)	Mfuzz_2.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Mfuzz
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Mfuzz
Package Short Url	http://bioconductor.org/packages/Mfuzz/
Package Downloads Report	Download Stats